Using the plugin from the command line
The plugin will requires the following options:
option | type | description/value |
---|---|---|
--run h2 | MANDATORY | name of the plugin |
--time_window value | MANDATORY | length time window (s) |
--max_lag value | MANDATORY | maximum lag duration (s) |
--step value | MANDATORY | step in seconds |
--algorithm value | optional | h2 r2 (default is h2) |
--downsampling_factor value | optional | default is 1 (no downsampling). Set to 2 to reduce the sr by 2 |
This plugin also supports the following common options:
option | type |
---|---|
--input_file | MANDATORY |
--use_markers | optional |
--skip_markers | optional |
--output_dir | optional |
--output_prefix | optional |
--marker_file | optional |
--montage_file | optional |
Command line examples
Compute h2 on EEG data using a specific marker file and only on H2 markers.
The frequency band is 1-40.
anywave --run h2 --input_file d:\data\myfile.eeg --time_window 4 --step 1 --max_lag 0.1 --marker_file d:\data\h2markers.mrk --use_markers "H2" --hp 1 --lp 40
Compute r2 on the same data assuming the data file has markers named H2:
anywave --run h2 --algorithm r2 --input_file d:\data\myfile.eeg --time_window 4 --step 1 --max_lag 0.1 --use_markers "H2" --hp 1 --lp 40