Using the plugin from the command line

The plugin will requires the following options:

option	type	description/value
--run spectral	MANDATORY	name of the plugin
--time_window value	MANDATORY	length of fft window in s
--overlap value	MANDATORY	overlap length for next fft window
--windowing type	optional	a string containing either Hanning, Hamming or None

This plugin also supports the following common options:

option	type
--input_file	MANDATORY
--use_markers	optional
--skip_markers	optional
--output_dir	optional
--output_suffix	optional
--output_prefix	optional

command line examples

Basic usage

anywave --run spectral --input_file d:\data\myfile.eeg --time_window 1 --overlap 0.5

PSD will be computed for all channels in myfile.eeg, unless there is a myfile.eeg.mgt file.
PSD will be computed on the whole data unless there is a myfile.eeg.mrk file containing markers with durations.
The fft window will be 1s, and the fft overlap will be 0.5s.
The result file will go in d:\data.

force to compute on the whole data

anywave --run spectral --input_file d:\data\myfile.eeg --time_window 1 --overlap 0.5 --use_markers all_data 

avoid artefacts (assuming we have a myfile.eeg.mrk file)

anywave --run spectral --input_file d:\data\myfile.eeg --time_window 1 --overlap 0.5 --skip_markers artefact

Customize output file name

anywave --run spectral --input_file d:\data\myfile.eeg --time_window 1 --overlap 0.5 --output_prefix psd --output_suffix custom

That will generate d:\data\psd_fftwindow-1024_fftoverlap-512_windowing-hanning_custom.mat