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Update Imaginary Coherence authored by Bruno Colombet's avatar Bruno Colombet
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plugins/Imaginary-Coherence.md
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...@@ -12,23 +12,23 @@ anywave --run imaginary-coherence --input_file <file> --low_freq 8 --high_freq 1 ...@@ -12,23 +12,23 @@ anywave --run imaginary-coherence --input_file <file> --low_freq 8 --high_freq 1
``` ```
# Parameters # Parameters
* low_freq: low frequency bin in Hz. Default value is 8Hz. * **low_freq**: low frequency bin in Hz. Default value is 8Hz.
* high_freq: high frequency bin in Hz. Default value is 12Hz. * **high_freq**: high frequency bin in Hz. Default value is 12Hz.
* fft_window: duration of the FFT window used in seconds. Default value is 1s. * **fft_window**: duration of the FFT window used in seconds. Default value is 1s.
* fft_overlap: duration of the FFT shift in seconds. Default is 0.25s. * **fft_overlap**: duration of the FFT shift in seconds. Default is 0.25s.
When launched in GUI mode, the plugin allows to select the output file path to store results. When launched in GUI mode, the plugin allows to select the output file path to store results.
By default a file results.mat will be created in the current data folder. By default a file results.mat will be created in the current data folder.
# Result file # Result file
A MATLAB file containing the following variables: A MATLAB file containing the following variables:
* method: a string to mention the method. * **method**: a string to mention the method.
* sampling_rate: data sampling rate in Hz * **sampling_rate**: data sampling rate in Hz
* high_freq: high freq parameter value * **high_freq**: high freq parameter value
* low_freq: low freq parameter value * **low_freq**: low freq parameter value
* fft_window: fft_window parameter value * **fft_window**: fft_window parameter value
* fft_overlap: fft_overlap parameter value * **fft_overlap**: fft_overlap parameter value
* electrode_names : cell array of strings containing the labels of channels * **electrode_names **: cell array of strings containing the labels of channels
* coherence : nChannels x nChannels x nSections matrix containing the coherence values. * **coherence **: nChannels x nChannels x nSections matrix containing the coherence values.
* sections: structure containing the section named in AnyWave and the starting and ending positions in seconds. * **sections**: structure containing the section named in AnyWave and the starting and ending positions in seconds.
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